Summary
Training neural networks that operate on MSAs is improved when diversity is greedily maximized (1).
See also
- Evoformer
- MSA Transformer
- Sequence diffusion
- Variant effect prediction with homology-aware PLMs improves with ensembling of multiple prompts
1.
Alamdari S, Thakkar N, van den Berg R, Lu AX, Fusi N, Amini AP, et al. Protein generation with evolutionary diffusion: sequence is all you need. In: NeurIPS 2023 Generative AI and Biology Workshop. 2023. Available from: https://mlanthology.org/neuripsw/2023/alamdari2023neuripsw-protein/