Summary
The pLDDT and PAE values of protein folding neural networks are correlated (1,2).
Figures
Figures from (1)
Ref (2) showing pLDDT values from different NNs
1.
Bennett NR, Coventry B, Goreshnik I, Huang B, Allen A, Vafeados D, et al. Improving de novo protein binder design with deep learning. Nature Communications. 2023;14(1). Available from: https://doi.org/10.1038/s41467-023-38328-5
2.
Strashnov P, Shevtsov A, Meshchaninov V, Ivanova M, Nikolaev F, Kardymon O, et al. Towards Robust Evaluation of Protein Generative Models: A Systematic Analysis of Metrics. openRxiv; 2024. Available from: https://doi.org/10.1101/2024.10.25.620213