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Abs modeled using MD are better for featurization than those modeled using homology modeling

Abs modeled using MD are better for featurization than those modeled using homology modeling

Created Aug 05, 2024Modified Apr 21, 2026

  • conformational-dynamics/molecular-dynamics

Summary

Antibodies modeled using MD simulations for 400 nanoseconds give higher-quality features that are easier to discriminate compared to simple homology modeling (Victor Greiff, presentation at UGM Munich, June 2023).

See also

  • MD simulations can distinguish enzyme design candidates for catalytically competent substates

Graph View

Backlinks

  • Features for antibody property prediction derived from MD simulations outperform those from language models and static structures
  • MD simulations can distinguish enzyme design candidates for catalytically competent substates

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