Summary
Multiplexed ASR involves the generation of many possible phylogenetic trees in parallel. It was used by (1) to train small PLMs.
1.
Matthews DS, Spence MA, Mater AC, Nichols J, Pulsford SB, Sandhu M, et al. Leveraging ancestral sequence reconstruction for protein representation learning. Nature Machine Intelligence. 2024;6(12):1542–55. Available from: https://doi.org/10.1038/s42256-024-00935-2