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Ancestral sequence reconstruction

Ancestral sequence reconstruction

Created Apr 10, 2026Modified Apr 20, 2026

Ancestral sequence reconstruction refers to the process of inferring ancestral sequences using extant sequences. Figure from (1)

1.
Dishman AF, Tyler RC, Fox JC, Kleist AB, Prehoda KE, Babu MM, et al. Evolution of fold switching in a metamorphic protein. Science. 2021;371(6524):86–90. Available from: https://doi.org/10.1126/science.abd8700

6 items with this tag.

  • Apr 21, 2026

    Ancestral enzymes are not always more generalist

    • ancestral-sequence-reconstruction
  • Apr 21, 2026

    Ancestral sequence reconstruction outperforms generative ML methods on functional enzyme design

    • ancestral-sequence-reconstruction
  • Apr 21, 2026

    Ancestrally reconstructed enzymes show greater expression than extant enzymes

    • ancestral-sequence-reconstruction
  • Apr 21, 2026

    Ancestrally reconstructed sequences are more thermostable than extant sequences

    • thermostability/evolution
    • ancestral-sequence-reconstruction
  • Apr 21, 2026

    Including sequences from multiplexed ancestral sequence reconstruction improves PLM training

    • protein-language-models/training
    • ancestral-sequence-reconstruction
  • Apr 21, 2026

    The activity profiles of ancestrally reconstructed enzymes are more difficult to predict than extant or ML-generated enzymes

    • ancestral-sequence-reconstruction

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