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Tag: structure-prediction/metrics
9 items with this tag.
Apr 21, 2026
Sequence perplexity and TM-score are negatively correlated when predicting structure using protein language models
structure-prediction/metrics
tm-score
Apr 21, 2026
Structure prediction metrics can be used to predict oligomer stoichiometry
structure-prediction/metrics
tm-score
Apr 21, 2026
Structure prediction uncertainty metrics as energy functions
structure-prediction/metrics
tm-score
plddt
pae
Apr 21, 2026
The confidence metrics of AlphaFold2 are better calibrated than those of AlphaFold3
alphafold3
alphafold2
structure-prediction/metrics
Apr 21, 2026
pLDDT and PAE in protein folding neural networks are correlated
structure-prediction/metrics
plddt
pae
Apr 21, 2026
pLDDT correlates with number of homologous sequences provided during runtime
structure-prediction/metrics
plddt
Apr 21, 2026
Confidence metrics for diffusion-based structure prediction methods can be improved with minimal changes to conditioning representations
diffusion-models/structure-prediction
diffusion-guidance/structure-prediction
protein-folding/structure-prediction
structure-prediction/metrics
tm-score
plddt
Apr 21, 2026
Confidence metrics from structure prediction correlate with accuracy even in the absence of coevolutionary data
structure-prediction/metrics
tm-score
plddt
Apr 21, 2026
DiffDock confidence is inversely correlated with RMSD
structure-prediction/metrics
plddt
pae