Quartz 4

Tag: structure-prediction/metrics

9 items with this tag.

  • Apr 21, 2026

    Sequence perplexity and TM-score are negatively correlated when predicting structure using protein language models

    • structure-prediction/metrics
    • tm-score
  • Apr 21, 2026

    Structure prediction metrics can be used to predict oligomer stoichiometry

    • structure-prediction/metrics
    • tm-score
  • Apr 21, 2026

    Structure prediction uncertainty metrics as energy functions

    • structure-prediction/metrics
    • tm-score
    • plddt
    • pae
  • Apr 21, 2026

    The confidence metrics of AlphaFold2 are better calibrated than those of AlphaFold3

    • alphafold3
    • alphafold2
    • structure-prediction/metrics
  • Apr 21, 2026

    pLDDT and PAE in protein folding neural networks are correlated

    • structure-prediction/metrics
    • plddt
    • pae
  • Apr 21, 2026

    pLDDT correlates with number of homologous sequences provided during runtime

    • structure-prediction/metrics
    • plddt
  • Apr 21, 2026

    Confidence metrics for diffusion-based structure prediction methods can be improved with minimal changes to conditioning representations

    • diffusion-models/structure-prediction
    • diffusion-guidance/structure-prediction
    • protein-folding/structure-prediction
    • structure-prediction/metrics
    • tm-score
    • plddt
  • Apr 21, 2026

    Confidence metrics from structure prediction correlate with accuracy even in the absence of coevolutionary data

    • structure-prediction/metrics
    • tm-score
    • plddt
  • Apr 21, 2026

    DiffDock confidence is inversely correlated with RMSD

    • structure-prediction/metrics
    • plddt
    • pae

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